2026-10-06T18:12:24Z https://api.figshare.com/v2/oai

oai:figshare.com:article/34054359 2026-10-02T05:33:36Z category_374 portal_316 item_type_3 month_year_10_2026

Data Sheet 1_Reduced hepatic GLUL expression accompanies altered RIP3/MLKL-pathway protein abundance in early cholestatic liver injury following bile duct ligation.zip Baiyu Yao (14062944) Fanhe Xiao (25162431) Zhong Tian (760299) Juan Kong (2230867) Clinical and Sports Nutrition bile duct ligation cholestatic liver injury GLUL necroptosis-related genes RIP3/MLKL-related signaling Background<p>Obstructive cholestasis is characterized by disturbances in bile acid homeostasis, amino acid metabolism, inflammatory responses, and hepatocellular injury. Although RIP3/MLKL-pathway proteins have been implicated in cholestatic liver damage, their relationship with metabolic alterations remains incompletely understood. This study aimed to identify necroptosis-related genes and associated metabolic-pathway alterations in early bile duct ligation (BDL)-induced cholestatic liver injury through integrated bioinformatics analyses and experimental validation.</p>Methods<p>Gene expression datasets GSE29776 and GSE166867 were retrieved from the Gene Expression Omnibus database. Differentially expressed genes (DEGs) and necroptosis-related differentially expressed genes (NRDEGs) were identified. Functional enrichment analyses, protein–protein interaction network construction, least absolute shrinkage and selection operator (LASSO) regression, and random forest analysis were performed to prioritize candidate genes. A murine BDL model was established for validation using biochemical assays, histological analyses, RT-qPCR, and western blotting. Phosphorylated RIP3 and MLKL were evaluated both relative to GAPDH and as phosphorylation-to-total-protein ratios.</p>Results<p>Eight NRDEGs were identified, including Tnfaip3, Sqstm1, Chmp2b, Ifngr2, Slc25a4, Ifngr1, Camk2d, and Glul. Functional enrichment analyses revealed significant enrichment in pathways related to metabolic regulation, transmembrane transporter activity, inflammatory signaling, and necroptosis. Machine-learning analyses prioritized Sqstm1, Ifngr1, and Glul as candidates for exploratory characterization. Glul, which encodes glutamine synthetase (GLUL), was markedly downregulated in cholestatic liver tissues. Experimental validation confirmed bile acid accumulation, reduced Glul mRNA expression and GLUL protein abundance, and increased GAPDH-normalized RIP3, p-RIP3, MLKL, and p-MLKL abundance in BDL mice. Both the p-RIP3/RIP3 and p-MLKL/MLKL ratios were significantly increased, supporting enhanced phosphorylation of RIP3 and MLKL relative to the corresponding total-protein levels.</p>Conclusion<p>In early BDL-induced cholestatic liver injury, reduced hepatic Glul mRNA expression and GLUL protein abundance occurred concurrently with increased RIP3 and MLKL phosphorylation relative to the corresponding total-protein levels. These findings support enhanced RIP3/MLKL-associated signaling but do not independently establish pathway-dependent necroptotic flux. Further mechanistic validation is required.</p> 2026-10-02T05:33:36Z Dataset Dataset 10.3389/fnut.2026.1912372.s004 https://figshare.com/articles/dataset/Data_Sheet_1_Reduced_hepatic_GLUL_expression_accompanies_altered_RIP3_MLKL-pathway_protein_abundance_in_early_cholestatic_liver_injury_following_bile_duct_ligation_zip/34054359 CC BY 4.0