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        <datestamp>2026-10-01T17:30:34Z</datestamp>
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          <dc:title>&lt;p&gt;Cytokine gene expression changes in pSIOs following LPS treatment.&lt;/p&gt;</dc:title>
          <dc:creator>Sumin Park (1418677)</dc:creator>
          <dc:creator>Boram Lee (549836)</dc:creator>
          <dc:creator>Dahye Kim (4750968)</dc:creator>
          <dc:creator>Sheet Sunirmal (25157743)</dc:creator>
          <dc:creator>Min Gook Lee (25157746)</dc:creator>
          <dc:creator>Haesun Lee (13907847)</dc:creator>
          <dc:creator>Sun A. Ock (17671438)</dc:creator>
          <dc:creator>Jae Gyu Yoo (18291035)</dc:creator>
          <dc:subject>Biophysics</dc:subject>
          <dc:subject>Biochemistry</dc:subject>
          <dc:subject>Microbiology</dc:subject>
          <dc:subject>Cell Biology</dc:subject>
          <dc:subject>Genetics</dc:subject>
          <dc:subject>Molecular Biology</dc:subject>
          <dc:subject>Physiology</dc:subject>
          <dc:subject>Chemical Sciences not elsewhere classified</dc:subject>
          <dc:subject>Science Policy</dc:subject>
          <dc:subject>Immunology</dc:subject>
          <dc:subject>Biological Sciences not elsewhere classified</dc:subject>
          <dc:subject>Infectious Diseases</dc:subject>
          <dc:subject>potentially reducing reliance</dc:subject>
          <dc:subject>cell models fail</dc:subject>
          <dc:subject>adult jejunum stimulated</dc:subject>
          <dc:subject>functional categories associated</dc:subject>
          <dc:subject>bile acid signaling</dc:subject>
          <dc:subject>div &gt;&lt; p</dc:subject>
          <dc:subject>cytokine gene expression</dc:subject>
          <dc:subject>studying intestinal inflammation</dc:subject>
          <dc:subject>intestinal tract</dc:subject>
          <dc:subject>associated diseases</dc:subject>
          <dc:subject>receptor signaling</dc:subject>
          <dc:subject>inflammatory signaling</dc:subject>
          <dc:subject>vitro &lt;/</dc:subject>
          <dc:subject>valuable platform</dc:subject>
          <dc:subject>transcriptome analysis</dc:subject>
          <dc:subject>time pcr</dc:subject>
          <dc:subject>thereby posing</dc:subject>
          <dc:subject>related pathways</dc:subject>
          <dc:subject>proteins involved</dc:subject>
          <dc:subject>physiologically relevant</dc:subject>
          <dc:subject>nutrient transport</dc:subject>
          <dc:subject>major threat</dc:subject>
          <dc:subject>inflammatory stress</dc:subject>
          <dc:subject>induced alterations</dc:subject>
          <dc:subject>increased tlr4</dc:subject>
          <dc:subject>including enrichment</dc:subject>
          <dc:subject>immunofluorescence staining</dc:subject>
          <dc:subject>findings demonstrate</dc:subject>
          <dc:subject>enriched pathways</dc:subject>
          <dc:subject>barrier maintenance</dc:subject>
          <dc:subject>barrier integrity</dc:subject>
          <dc:subject>animal testing</dc:subject>
          <dc:subject>analyzing changes</dc:subject>
          <dc:subject>altered expression</dc:subject>
          <dc:subject>3rs principle</dc:subject>
          <dc:description>&lt;p&gt;(A) Immunofluorescence staining of TLR4 in pSIOs after LPS (20 μM) treatment. Nuclei were stained with DAPI (blue), and TLR4 expression is shown in green. Representative images suggest higher TLR4 immunofluorescence in the LPS-treated group than in the control group. Images are representative of three independent biological replicates (n = 3), with at least five organoids analyzed for each treatment condition in each biological replicate. Scale bar = 100 μm. (B) qRT-PCR analysis of pro- and anti-inflammatory cytokines in pSIOs after LPS (20 μM) exposure. Pro-inflammatory cytokines &lt;i&gt;TNF-α&lt;/i&gt;, &lt;i&gt;IL-1β&lt;/i&gt;, and &lt;i&gt;IL-8&lt;/i&gt; were significantly upregulated in the LPS-treated group compared with the control group. Anti-inflammatory cytokines &lt;i&gt;IL-4&lt;/i&gt; and &lt;i&gt;IL-10&lt;/i&gt; also showed significantly increased expression, whereas &lt;i&gt;TGF-β&lt;/i&gt; expression was increased but did not reach statistical significance following LPS stimulation. Data are presented as the mean ± SD from three biological replicates (n = 3); each biological replicate was analyzed using five technical replicates. *&lt;i&gt;p&lt;/i&gt; &lt; 0.05, **&lt;i&gt;p&lt;/i&gt; &lt; 0.01.&lt;/p&gt;</dc:description>
          <dc:date>2026-10-01T17:30:26Z</dc:date>
          <dc:type>Image</dc:type>
          <dc:type>Figure</dc:type>
          <dc:identifier>10.1371/journal.pone.0359086.g004</dc:identifier>
          <dc:relation>https://figshare.com/articles/figure/_p_Cytokine_gene_expression_changes_in_pSIOs_following_LPS_treatment_p_/34048153</dc:relation>
          <dc:rights>CC BY 4.0</dc:rights>
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