<?xml version='1.0' encoding='utf-8'?>
<?xml-stylesheet type="text/xsl" href="/v2/static/oai2.xsl"?>
<OAI-PMH xmlns="http://www.openarchives.org/OAI/2.0/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/ http://www.openarchives.org/OAI/2.0/OAI-PMH.xsd">
  <responseDate>2026-10-11T19:37:59Z</responseDate>
  <request identifier="oai:figshare.com:article/34036148" metadataPrefix="oai_dc" verb="GetRecord">https://api.figshare.com/v2/oai</request>
  <GetRecord>
    <record>
      <header>
        <identifier>oai:figshare.com:article/34036148</identifier>
        <datestamp>2026-09-30T17:44:30Z</datestamp>
        <setSpec>category_7</setSpec>
        <setSpec>category_13</setSpec>
        <setSpec>category_14</setSpec>
        <setSpec>category_15</setSpec>
        <setSpec>category_21</setSpec>
        <setSpec>category_272</setSpec>
        <setSpec>category_734</setSpec>
        <setSpec>category_811</setSpec>
        <setSpec>category_132</setSpec>
        <setSpec>category_133</setSpec>
        <setSpec>portal_5</setSpec>
        <setSpec>item_type_3</setSpec>
        <setSpec>month_year_09_2026</setSpec>
      </header>
      <metadata>
        <oai_dc:dc xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"  xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:dc="http://purl.org/dc/elements/1.1/" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
          <dc:title>&lt;p&gt;Accuracy, Sensitivity and Specificity for CADD and REVEL with strong evidence of classification. Labeled benign and labeled pathogenic variants were used to evaluate ClinVar 2019 derived score thresholds and thresholds derived from the DVD likelihood and prior probability of 12.6% or tolerance-based prior unique to each bin defined in Table 1.&lt;/p&gt;</dc:title>
          <dc:creator>Rose A. Gogal (25145417)</dc:creator>
          <dc:creator>Genevieve M. Cox (25145420)</dc:creator>
          <dc:creator>Diana L. Kolbe (25145423)</dc:creator>
          <dc:creator>Amanda M. Odell (25145426)</dc:creator>
          <dc:creator>Chloe E. Ovel (25145429)</dc:creator>
          <dc:creator>Katherine I. McCormick (25145432)</dc:creator>
          <dc:creator>Brian Hong (9094275)</dc:creator>
          <dc:creator>Hela Azaiez (713978)</dc:creator>
          <dc:creator>Thomas L. Casavant (10476490)</dc:creator>
          <dc:creator>Richard J. H. Smith (10957842)</dc:creator>
          <dc:creator>Terry A. Braun (18231361)</dc:creator>
          <dc:creator>Michael J. Schnieders (1782085)</dc:creator>
          <dc:subject>Medicine</dc:subject>
          <dc:subject>Genetics</dc:subject>
          <dc:subject>Molecular Biology</dc:subject>
          <dc:subject>Neuroscience</dc:subject>
          <dc:subject>Biotechnology</dc:subject>
          <dc:subject>Environmental Sciences not elsewhere classified</dc:subject>
          <dc:subject>Biological Sciences not elsewhere classified</dc:subject>
          <dc:subject>Mathematical Sciences not elsewhere classified</dc:subject>
          <dc:subject>Infectious Diseases</dc:subject>
          <dc:subject>Plant Biology</dc:subject>
          <dc:subject>world &amp;# 8217</dc:subject>
          <dc:subject>patient &amp;# 8217</dc:subject>
          <dc:subject>identify twelve probands</dc:subject>
          <dc:subject>clinvar 2019 dataset</dc:subject>
          <dc:subject>highlight two variants</dc:subject>
          <dc:subject>deafness variation database</dc:subject>
          <dc:subject>higher prior probability</dc:subject>
          <dc:subject>dvd dataset demonstrates</dc:subject>
          <dc:subject>missense variation based</dc:subject>
          <dc:subject>computational evidence based</dc:subject>
          <dc:subject>labeled dvd variants</dc:subject>
          <dc:subject>752 missense variants</dc:subject>
          <dc:subject>237 missense variants</dc:subject>
          <dc:subject>deafness associated vus</dc:subject>
          <dc:subject>protein folding stability</dc:subject>
          <dc:subject>7 %) genes</dc:subject>
          <dc:subject>least 2 kcal</dc:subject>
          <dc:subject>intolerant dvd genes</dc:subject>
          <dc:subject>deafness variants</dc:subject>
          <dc:subject>7 %)</dc:subject>
          <dc:subject>vus ).</dc:subject>
          <dc:subject>posterior probability</dc:subject>
          <dc:subject>752 ).</dc:subject>
          <dc:subject>237 ).</dc:subject>
          <dc:subject>0 kcal</dc:subject>
          <dc:subject>uncertain significance</dc:subject>
          <dc:subject>three bins</dc:subject>
          <dc:subject>simpler versions</dc:subject>
          <dc:subject>public resource</dc:subject>
          <dc:subject>protein misfolding</dc:subject>
          <dc:subject>probabilistic frameworks</dc:subject>
          <dc:subject>genetic diagnosis</dc:subject>
          <dc:subject>biophysical rationale</dc:subject>
          <dc:subject>biophysical characterization</dc:subject>
          <dc:subject>best accuracy</dc:subject>
          <dc:subject>bayesian model</dc:subject>
          <dc:subject>amp recommendations</dc:subject>
          <dc:subject>also offering</dc:subject>
          <dc:subject>577 classified</dc:subject>
          <dc:description>&lt;p&gt;Accuracy, Sensitivity and Specificity for CADD and REVEL with strong evidence of classification. Labeled benign and labeled pathogenic variants were used to evaluate ClinVar 2019 derived score thresholds and thresholds derived from the DVD likelihood and prior probability of 12.6% or tolerance-based prior unique to each bin defined in Table 1.&lt;/p&gt;</dc:description>
          <dc:date>2026-09-30T17:56:54Z</dc:date>
          <dc:type>Dataset</dc:type>
          <dc:type>Dataset</dc:type>
          <dc:identifier>10.1371/journal.pgen.1012085.t003</dc:identifier>
          <dc:relation>https://figshare.com/articles/dataset/_p_Accuracy_Sensitivity_and_Specificity_for_CADD_and_REVEL_with_strong_evidence_of_classification_Labeled_benign_and_labeled_pathogenic_variants_were_used_to_evaluate_ClinVar_2019_derived_score_thresholds_and_thresholds_derived_from_the_DVD/34036148</dc:relation>
          <dc:rights>CC BY 4.0</dc:rights>
        </oai_dc:dc>
      </metadata>
    </record>
  </GetRecord>
</OAI-PMH>
