2026-10-06T17:26:12Z https://api.figshare.com/v2/oai

oai:figshare.com:article/34022280 2026-09-30T05:36:38Z category_23962 item_type_3 month_year_09_2026

Transcript FASTA, per-transcript annotations, AS/lncRNA/CDS/TF/SSR for Auxenochlorella pyrenoidosa SHOU-1002 Wang Liufu (25136247) Aquaculture Auxenochlorella pyrenoidosa SHOU-1002 <p dir="ltr">Auxenochlorella pyrenoidosa is valued for both biofuel production and nutritional lipids. The study presents a full-length transcriptome analysis of this species under nitrogen-sufficient and nitrogen-starvation conditions. Using single-molecule real-time (SMRT) sequencing on the PacBio Sequel platform, we generated 6.46 million HiFi reads and obtained 68,417 high-confidence non-redundant transcripts. Functional annotation assigned putative functions to 94.74% of these sequences. Comprehensive analyses identified 65,032 protein-coding transcripts, each represented by a single best ORF selected from 70,785 candidate ORFs initially predicted by TransDecoder, together with 4,910 long non-coding RNAs, 111,209 unvalidated transcript-pair differgences, 811transcription factors from 56 families, and 21,699 simple sequence repeats. This dataset provides a transcript-level sequence reference for A. pyrenoidosa, including a non-redundant transcript catalog of candidate transcript sequences and putative sequence variants. It is intended to serve as a resource for future genome-guided studies and for investigations into transcript diversity in this species.</p> 2026-09-30T05:36:38Z Dataset Dataset 10.6084/m9.figshare.34022280.v1 https://figshare.com/articles/dataset/Transcript_FASTA_per-transcript_annotations_AS_lncRNA_CDS_TF_SSR_for_Auxenochlorella_pyrenoidosa_SHOU-1002/34022280 CC BY 4.0