2026-10-12T16:37:29Z https://api.figshare.com/v2/oai

oai:figshare.com:article/34014564 2026-09-28T15:21:33Z category_24193 category_24199 category_24208 item_type_3 month_year_09_2026

Corset-clustered larval transcriptome reference of <i>Salamandra salamandra</i>. Meryam Carrus (23844192) Tiziana Castrignanò (19538026) Genomics and transcriptomics Sequence analysis Bioinformatics and computational biology not elsewhere classified Salamandra salamandra transcriptome RNA-seq Corset de novo transcriptome <p dir="ltr">This record contains the Corset-processed transcriptome reference used for the transcriptomic analysis of <i>Salamandra salamandra</i> larvae. The reference was derived from the publicly available de novo unigene assembly generated by Libro et al. and was further clustered using Corset to reduce transcript redundancy. The resulting reference comprises 289,879 contigs assigned to 229,626 Corset clusters.</p><p dir="ltr">This Corset-processed transcriptome was used as the reference for transcript abundance estimation with Salmon and for subsequent cluster-level differential expression analyses. Transcript abundances were aggregated to Corset clusters using the transcript-to-cluster assignments encoded in the reference.</p><p dir="ltr">The dataset was used in the study “Transcriptomic correlates of dispersal-related behavioural profiles in <i>Salamandra salamandra</i> larvae across a mitochondrial contact zone”.</p> 2026-09-28T15:21:33Z Dataset Dataset 10.6084/m9.figshare.34014564.v1 https://figshare.com/articles/dataset/Corset-clustered_larval_transcriptome_reference_of_i_Salamandra_salamandra_i_/34014564 CC BY 4.0