2026-10-13T04:35:48Z https://api.figshare.com/v2/oai

oai:figshare.com:article/34005651 2026-09-27T21:51:01Z category_24310 item_type_3 month_year_09_2026

Salminus brasiliensis minimal reference pangenome graph (reduced version), with four chromosome-level haplotypes (two individuals: ARG-BRA), Only 25 chromosome sets (without unplaced scaffolds). Gabriel Yazbeck (4638643) Genomics Pangenome minigraph structural variants genetic polymorphism graph genetic diversity LARGE Reference bias <p dir="ltr">The 25 nuclear chromosomes reduced version of the minimal reference pangenome graph for Salminus brasiliensis (dourado, dorado), the migratory Neotropical fish. It was obtained with minigraph and uses the absolute reference genome coordinate system from VGP (Hap2). The four haplotypes (two from VGP/ARG, two from LARGE/BRA) were filtered off for all unplaced scaffolds, making for a slighter cleaner version for low-cost assembly of short-reads reference based assembly (attenuating reference-bias), informed structural variant calls and other downstream genomic applications. </p> 2026-09-27T21:51:01Z Dataset Dataset 10.6084/m9.figshare.34005651.v1 https://figshare.com/articles/dataset/Salminus_brasiliensis_minimal_reference_pangenome_graph_reduced_version_with_four_chromosome-level_haplotypes_two_individuals_ARG-BRA_Only_25_chromosome_sets_without_unplaced_scaffolds_/34005651 GPL 3.0+ Open Access after 2026-12-31