2026-10-14T17:54:06Z https://api.figshare.com/v2/oai

oai:figshare.com:article/33986329 2026-09-24T15:00:38Z category_24304 category_24301 item_type_3 month_year_09_2026

Deep read analysis of SRA available PAXgene RNA samples Jeremy Prokop (8082587) Genetic immunology Gene mapping NCBI SRA PAXgene RNA <p dir="ltr">The PAXgene Cross-Project Atlas is an offline, interactive resource integrating deidentified human whole-blood RNA-sequencing results from 20,456 sequencing runs across 133 BioProjects. The atlas combines within-project normalized host-expression programs, Salmon mapping quality, Kraken2 sequence-reference classifications, sample annotations, batch-normalization diagnostics and exploratory joint rare-event screens. It enables sample-level comparison with project peers, cross-cohort identification of recurrent host-response signatures and prioritization of unusual host–sequence co-occurrences for raw-read validation. Taxonomic classifications represent sequence-reference matches and are not interpreted as evidence of infection, organism viability or causation.</p> 2026-09-24T15:00:38Z Dataset Dataset 10.6084/m9.figshare.33986329.v1 https://figshare.com/articles/dataset/Deep_read_analysis_of_SRA_available_PAXgene_RNA_samples/33986329 CC BY 4.0