2026-10-11T22:37:30Z https://api.figshare.com/v2/oai

oai:figshare.com:article/33969013 2026-09-22T22:04:50Z category_44 portal_316 item_type_3 month_year_09_2026

Data Sheet 3_Integrated transcriptomic and metabolomic ecotoxicity assessment of earthworms exposed to ZnO and Mn-doped ZnO nanomaterials.csv Henk J. van Lingen (3269640) Paraskevi Zagana (25092115) Changlin Ke (25092118) Edoardo Saccenti (217343) Marta Baccaro (9666874) Maria I. Klapa (550871) Zoi G. Lada (6519512) Nico W. van den Brink (8452881) Maria Suarez-Diez (3404327) Toxicology enrichment analysis gene expression invertebrate metabolome mode of action multicomponent nanomaterial Introduction<p>Zinc oxide (ZnO)-containing nanomaterials may elicit toxic responses in environmental organisms such as earthworms. In this study, we investigate the time-dependent gene expression and metabolomic response in earthworms exposed to ZnO and Mn-doped ZnO (ZnO:Mn) nanomaterials (both at 850 mg/kg soil) and MnCl₂.</p>Methods<p>Earthworms were exposed to ZnO nanomaterial (850 mg/kg soil) for 2, 3, 4, or 7 days, to ZnO:Mn nanomaterial (850 mg/kg soil) for 2, 4, 7, or 14 days, and to MnCl₂ (45 mg/kg soil) for 14 days. Time-dependent molecular responses were characterized by transcriptomic and metabolomic analyses.</p>Results and Discussion<p>Strong differential gene expression was observed after 4 and 2 days of exposure to ZnO and ZnO:Mn, respectively. Moderate differential gene expression was observed after 14 days of exposure to ZnO:Mn and MnCl₂. Gene ontology (GO) enrichment analysis revealed that differentially expressed genes (DEGs) in earthworms exposed to ZnO were commonly associated with muscles and earthworm movements. Genes upregulated after 2 days of exposure to ZnO:Mn were linked to GO terms associated with microtubule-based structures mediating cellular motility. Downregulated genes were enriched to GO terms among which several were related to energy metabolism. For earthworms exposed to ZnO:Mn and MnCl₂ for 14 days, few DEGs were involved in GO terms related to diverse biological implications. Aligning with the limited number of GO terms observed, metabolomic disruptions only included increased glutamate and a tendency for increased aspartate in response to MnCl₂ and ZnO:Mn exposure for 14 days, respectively. Other amino acids and the oxidized-to-reduced glutathione ratio, an indicator of oxidative stress, were not affected. In summary, exposing earthworms to ZnO and ZnO:Mn nanomaterials induced a transient response in differential gene expression related to muscle biology, energy metabolism, and translation, which largely disappeared after 14 days. Combined with minimal metabolomic changes, these findings do not point to substantial long-term ecotoxic effects.</p> 2026-09-22T22:04:50Z Dataset Dataset 10.3389/ftox.2026.1927574.s004 https://figshare.com/articles/dataset/Data_Sheet_3_Integrated_transcriptomic_and_metabolomic_ecotoxicity_assessment_of_earthworms_exposed_to_ZnO_and_Mn-doped_ZnO_nanomaterials_csv/33969013 CC BY 4.0