2026-10-13T14:52:38Z https://api.figshare.com/v2/oai

oai:figshare.com:article/33941587 2026-09-21T11:37:22Z category_24193 item_type_3 month_year_09_2026

DEG Annotation file of both the varieties PUNEETH P V (25071226) Genomics and transcriptomics DEG ANNOTATION <p dir="ltr">Differentially expressed transcripts identified in the susceptible okra cultivar Pusa Sawani post Bhendi Yellow Vein Mosaic Virus (BYVMV) infection. The table contains the significantly differentially expressed transcripts, their statistics of expression and functional annotation. transcript_id is the assembled transcript identifier. logFC is the log2 fold change in expression between BYVMV-infected and control samples, with positive values indicating up-regulation and negative values indicating down-regulation in infected plants. FDR False Discovery Rate, the Benjamini–Hochberg adjusted p-value for determining statistical significance.</p><p dir="ltr">For functional annotation, KJB_id is the gene model identifier from the KJB okra reference genome annotation and B456_id is the corresponding gene identifier from the Bhendi-456 genome assembly. tair_locus indicates the best matching Arabidopsis thaliana locus found by sequence homology searches and used as reference for functional inference. bitscore is the BLAST alignment score of the best hit. Higher scores mean higher sequence similarity description is the predicted functional annotation of the transcript based on its closest homolog in public databases. * "NA" indicates that no reliable homologous sequence, functional annotation, or database match was obtained for the respective transcript. Only FDR < 0.05 transcripts are displayed.</p> 2026-09-21T11:37:22Z Dataset Dataset 10.6084/m9.figshare.33941587.v1 https://figshare.com/articles/dataset/DEG_Annotation_file_of_both_the_varieties/33941587 CC BY 4.0