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        <identifier>oai:figshare.com:article/33938736</identifier>
        <datestamp>2026-09-18T17:42:59Z</datestamp>
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        <oai_dc:dc xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"  xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:dc="http://purl.org/dc/elements/1.1/" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
          <dc:title>&lt;p&gt;Sequence of qPCR primers used in this study.&lt;/p&gt;</dc:title>
          <dc:creator>Izabela Hawro (25073349)</dc:creator>
          <dc:creator>Samuel M. Lee (23856924)</dc:creator>
          <dc:creator>Rhonda D. Kineman (7928561)</dc:creator>
          <dc:creator>Jose Cordoba-Chacon (7928618)</dc:creator>
          <dc:subject>Biochemistry</dc:subject>
          <dc:subject>Cell Biology</dc:subject>
          <dc:subject>Genetics</dc:subject>
          <dc:subject>Molecular Biology</dc:subject>
          <dc:subject>Physiology</dc:subject>
          <dc:subject>Chemical Sciences not elsewhere classified</dc:subject>
          <dc:subject>Science Policy</dc:subject>
          <dc:subject>Cancer</dc:subject>
          <dc:subject>Computational  Biology</dc:subject>
          <dc:subject>specific agonist rosiglitazone</dc:subject>
          <dc:subject>hepatocyte peroxisome proliferator</dc:subject>
          <dc:subject>determine whether hepatocyte</dc:subject>
          <dc:subject>treated obese mice</dc:subject>
          <dc:subject>mouse primary hepatocytes</dc:subject>
          <dc:subject>hep &lt;/ sup</dc:subject>
          <dc:subject>div &gt;&lt; p</dc:subject>
          <dc:subject>activated receptor gamma</dc:subject>
          <dc:subject>nuclear receptor pparγ</dc:subject>
          <dc:subject>key genes involved</dc:subject>
          <dc:subject>hepatic genes involved</dc:subject>
          <dc:subject>hepatic methionine cycle</dc:subject>
          <dc:subject>key genes</dc:subject>
          <dc:subject>genes involved</dc:subject>
          <dc:subject>hepatocytes (&lt;</dc:subject>
          <dc:subject>fed mice</dc:subject>
          <dc:subject>methionine cycle</dc:subject>
          <dc:subject>pparg &lt;/</dc:subject>
          <dc:subject>cbs &lt;/</dc:subject>
          <dc:subject>bhmt &lt;/</dc:subject>
          <dc:subject>whereas 6h</dc:subject>
          <dc:subject>transcriptional regulation</dc:subject>
          <dc:subject>previously reported</dc:subject>
          <dc:subject>phosphatidylethanolamine n</dc:subject>
          <dc:subject>negatively regulates</dc:subject>
          <dc:subject>methyltransferase (&lt;</dc:subject>
          <dc:subject>metabolic dysfunction</dc:subject>
          <dc:subject>mediated regulation</dc:subject>
          <dc:subject>independent regulation</dc:subject>
          <dc:subject>fatty acids</dc:subject>
          <dc:subject>dependent reduction</dc:subject>
          <dc:subject>cbs )&lt;/</dc:subject>
          <dc:subject>bhmt )&lt;/</dc:subject>
          <dc:description>&lt;div&gt;&lt;p&gt;Metabolic dysfunction-associated steatohepatitis (MASH) is associated with increased expression of hepatocyte peroxisome proliferator-activated receptor gamma (PPARγ, &lt;i&gt;Pparg&lt;/i&gt;) and reduced expression of hepatic genes involved in the methionine cycle. The nuclear receptor PPARγ is activated by fatty acids, and we have shown that the knockout of &lt;i&gt;Pparg&lt;/i&gt; in hepatocytes (&lt;i&gt;Pparg&lt;/i&gt;&lt;sup&gt;ΔHep&lt;/sup&gt;) reduces the negative effects of MASH on the metabolism of methionine. Here, we sought to determine whether hepatocyte &lt;i&gt;Pparg&lt;/i&gt; is required for the transcriptional regulation of genes involved in the methionine cycle in conditions with altered fatty acid flux to the liver: fasting, refeeding, and high-fat diet (HFD)-induced obesity/steatosis. Fasting increased the expression of key genes involved in the methionine cycle, whereas 6h-refeeding reversed these effects and reduced the expression of phosphatidylethanolamine N-methyltransferase (&lt;i&gt;Pemt)&lt;/i&gt; and cystathionine beta synthase (&lt;i&gt;Cbs)&lt;/i&gt;. Although fasting increased hepatocyte &lt;i&gt;Pparg&lt;/i&gt; expression, &lt;i&gt;Pparg&lt;/i&gt;&lt;sup&gt;ΔHep&lt;/sup&gt; did not enhance the fasting and refeeding-mediated regulation of methionine cycle gene expression. We previously reported that diet-induced steatosis increased hepatocyte &lt;i&gt;Pparg&lt;/i&gt; expression, and here we show that PPARγ-specific agonist rosiglitazone (RSG) reduced the expression of betaine homocysteine S-methyltransferase (&lt;i&gt;Bhmt)&lt;/i&gt; and &lt;i&gt;Cbs&lt;/i&gt; in diet-induced obese control mice. The PPARγ-dependent reduction of hepatic &lt;i&gt;Bhmt&lt;/i&gt; and &lt;i&gt;Cbs&lt;/i&gt; expression was confirmed in mouse primary hepatocytes. Interestingly, &lt;i&gt;Pparg&lt;/i&gt;&lt;sup&gt;ΔHep&lt;/sup&gt; increased the expression of &lt;i&gt;Pemt&lt;/i&gt; in HFD-fed mice and that of key genes of the methionine cycle in RSG-treated obese mice, including &lt;i&gt;Pemt, Bhmt&lt;/i&gt; and &lt;i&gt;Cbs&lt;/i&gt;, suggesting that &lt;i&gt;Pparg&lt;/i&gt; negatively regulates their expression in the liver&lt;i&gt;.&lt;/i&gt;&lt;/p&gt;&lt;/div&gt;</dc:description>
          <dc:date>2026-09-18T17:42:52Z</dc:date>
          <dc:type>Dataset</dc:type>
          <dc:type>Dataset</dc:type>
          <dc:identifier>10.1371/journal.pone.0358698.t001</dc:identifier>
          <dc:relation>https://figshare.com/articles/dataset/_p_Sequence_of_qPCR_primers_used_in_this_study_p_/33938736</dc:relation>
          <dc:rights>CC BY 4.0</dc:rights>
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