2026-10-12T04:39:53Z
https://api.figshare.com/v2/oai
oai:figshare.com:article/33866432
2026-09-16T17:38:45Z
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category_16
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portal_5
item_type_3
month_year_09_2026
<p>238 expressed <i>Pocillopora acuta</i> orthologs of <i>Stylophora pistillata</i> scRNA-based cell type marker genes.</p>
Zoe Dellaert (24998723)
Hollie M. Putnam (9088158)
Genetics
Physiology
Environmental Sciences not elsewhere classified
Chemical Sciences not elsewhere classified
Immunology
Biological Sciences not elsewhere classified
Developmental Biology
Cancer
Infectious Diseases
Virology
spatially resolved high
likely entail multi
including chitin synthase
div >< p
amino acid synthesis
pocillopora acuta </
wnt pathway members
specific gene expression
recognition genes consistent
recently via single
native tissue complexity
many genes implicated
greater spatial resolution
cell rna sequencing
reef building coral
single genes
rna sequencing
building coral
myd88 </
κb pathway
specific functions
spatial transcriptomics
characterize tissue
associated genes
cell types
cell adhesion
coral ’
coral biology
transmembrane transport
tlrs ),
stimulus response
specialized functions
oral tissues
multiple tissues
like receptors
exhibited 1
environmental sensing
distinct functions
developmental processes
connects tlrs
characterized microscopically
aboral tissues
<p>Reported statistics are: 1) baseMean: the mean normalized counts across all samples, 2) log2FoldChange: Log<sub>2</sub> Fold-Change between tissues, following <i>lfcShrink</i> function, 3) lfcSE: standard error of the Log<sub>2</sub> Fold-Change, 4) pvalue: DESeq Wald test p-value, 5) padj: Benjamini–Hochberg false discovery rate–adjusted p-value, 6) Spis_CellType_Full: metacell cluster name from [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0358454#pone.0358454.ref031" target="_blank">31</a>] for which this gene was a marker, and 7) Spis_CellType: simplified metacell cluster names with numerical identifiers removed.</p> <p>(XLSX)</p>
2026-09-16T17:38:29Z
Dataset
Dataset
10.1371/journal.pone.0358454.s012
https://figshare.com/articles/dataset/_p_238_expressed_i_Pocillopora_acuta_i_orthologs_of_i_Stylophora_pistillata_i_scRNA-based_cell_type_marker_genes_p_/33866432
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