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oai:figshare.com:article/33866429 2026-09-16T17:38:44Z category_13 category_16 category_272 category_873 category_46 category_734 category_61 category_64 category_132 category_134 portal_5 item_type_3 month_year_09_2026

Differentially expressed biomineralization genes, with z-score by sample (Fig 4). Zoe Dellaert (24998723) Hollie M. Putnam (9088158) Genetics Physiology Environmental Sciences not elsewhere classified Chemical Sciences not elsewhere classified Immunology Biological Sciences not elsewhere classified Developmental Biology Cancer Infectious Diseases Virology spatially resolved high likely entail multi including chitin synthase div >< p amino acid synthesis pocillopora acuta </ wnt pathway members specific gene expression recognition genes consistent recently via single native tissue complexity many genes implicated greater spatial resolution cell rna sequencing reef building coral single genes rna sequencing building coral myd88 </ κb pathway specific functions spatial transcriptomics characterize tissue associated genes cell types cell adhesion coral ’ coral biology transmembrane transport tlrs ), stimulus response specialized functions oral tissues multiple tissues like receptors exhibited 1 environmental sensing distinct functions developmental processes connects tlrs characterized microscopically aboral tissues Reported data/statistics are: 1) Heatmap_Label: Abbreviated gene name used in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0358454#pone.0358454.g004" target="_blank">Fig 4</a>, 2) query: Pocillopora acuta gene ID, 3) baseMean: the mean normalized counts across all samples, 4) log2FoldChange: Log2 Fold-Change between tissues, following lfcShrink function, 5) lfcSE: standard error of the Log2 Fold-Change, 6) pvalue: DESeq Wald test p-value, 7) padj: Benjamini–Hochberg false discovery rate–adjusted p-value, 8) List: Source of gene - either the published “biomineralization toolkit” or searched keywords (see Methods), 9) definition: BLAST-annotated gene name, 10) Classification: biomineralization gene classification (see Methods), 11) Reference: literature citation(s) for published “biomineralization toolkit” genes, and 12) Original_Accession: original accession numbers for “biomineralization toolkit” genes. Remaining columns are labelled by sample names, and contain the z-score by sample for each gene (<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0358454#pone.0358454.g004" target="_blank">Fig 4</a>). (XLSX) 2026-09-16T17:38:29Z Dataset Dataset 10.1371/journal.pone.0358454.s011 https://figshare.com/articles/dataset/_p_Differentially_expressed_biomineralization_genes_with_z-score_by_sample_Fig_4_p_/33866429 CC BY 4.0