2026-10-13T03:21:59Z https://api.figshare.com/v2/oai

oai:figshare.com:article/33719593 2026-09-14T07:13:52Z category_24310 item_type_3 month_year_09_2026

VIPerturb-seq Stage 7 custodian export: perturbation mean expression profiles Ziran Peng (24133968) Genomics perturb-seq CRISPR screen single-cell RNA sequencing <p dir="ltr">Custodian export for Stage 7 of VIPerturb-seq (genome-wide).</p><p><br></p><p dir="ltr">This dataset contains the mean expression profiles of 20 cells for each of 6168 perturbations that had at least 20 cells, computed from a genome-wide perturb-seq Seurat object. It also contains one control profile (pseudo-control branch, 2000 cells, since fewer than 2000 non-targeting cells were available).</p><p><br></p><p dir="ltr">The 20-cell draw was fixed by rule before any expression value was read. No full-depth perturbation profiles, no per-cell data and no held-out cells are included.</p><p><br></p><p dir="ltr">Files:</p><p dir="ltr">- stage7_input_means.f32: raw little-endian float32, targets x genes, row major (6168 x 19068), 470,445,696 bytes</p><p dir="ltr">- stage7_input_meta.json: gene names, target names, cell counts, scalars</p><p dir="ltr">- run.log: complete terminal output from the export</p><p><br></p><p dir="ltr">md5:</p><p dir="ltr">- stage7_input_means.f32: 7f47812563bac1bc32e248aa654e244e</p><p dir="ltr">- stage7_input_meta.json: 42f78a022353a88bed8ad6c1e24371cc</p> 2026-09-14T07:13:52Z Dataset Dataset 10.6084/m9.figshare.33719593.v1 https://figshare.com/articles/dataset/VIPerturb-seq_Stage_7_custodian_export_perturbation_mean_expression_profiles/33719593 CC BY 4.0