2026-10-14T05:35:06Z https://api.figshare.com/v2/oai

oai:figshare.com:article/33669070 2026-09-13T07:48:50Z category_24208 item_type_3 month_year_09_2026

Test Dataset for DelMoro Pipeline Houcemeddine Othman (10808337) Firas Zemzem (24844648) Bioinformatics and computational biology not elsewhere classified nextflow ’ medical genomics Whole Exome Sequencing (WES), reproducible research principles <p dir="ltr">This collection of small example files is intended to verify the functionality of the <a href="https://github.com/othmanResearch/DelMoro" target="_blank" rel="noreferrer">DelMoro</a> pipeline. It facilitates quick testing of both full-mode and step-mode workflows, removing the need for extensive input files or simulated datasets while guaranteeing correct functioning across all processing modules. The dataset has been modified from resources created by <a href="https://orcid.org/0000-0002-1561-078X" target="_blank" rel="noreferrer">Geert van Geest </a>and <a href="https://orcid.org/0000-0001-9062-6303" target="_blank" rel="noreferrer">Patricia Palagi</a> for the<a href="https://sib-swiss.github.io/NGS-variants-training/2023.9/" target="_blank" rel="noreferrer"> NGS - variant analysis training course</a>. The input files, FASTQ sequences, reference genome, 1000 Genomes gold standard indels (1000g_gold_standard.indels.filtered.vcf), and GRCh38 annotations (GCF.38.filtered.renamed.vcf), are provided exactly as they were given by the original creators. The other files, which include VCF format outputs and BAM files, were produced by running these inputs through the DelMoro pipeline.</p> 2026-09-13T07:48:50Z Dataset Dataset 10.6084/m9.figshare.33669070.v1 https://figshare.com/articles/dataset/Test_Dataset_for_DelMoro_Pipeline/33669070 CC BY 4.0