2026-10-10T03:10:40Z https://api.figshare.com/v2/oai

oai:figshare.com:article/33659944 2026-09-12T10:31:19Z category_24736 category_24733 category_24727 category_24742 item_type_3 month_year_09_2026

Spinal cord connectome dataset Oliver Schmitt (7519691) Computational neuroscience (incl. mathematical neuroscience and theoretical neuroscience) Central nervous system Autonomic nervous system Peripheral nervous system spinal cord - spinal cord connection <p dir="ltr"><b>Dataset associated with the spinal cord connectomics project and the evidence-based reconstruction of the mammalian spinal cord connectome.</b></p><p dir="ltr">The archive contains the neuroVIISAS project representation of the spinal cord connectome together with adjacency matrices and the anatomical region selection used for the analyses reported in the associated publication.</p><p dir="ltr"><b>Contents of the archive:</b></p><ol><li><code><strong>SpinalCordConnectomeProject.brain</strong></code><br>neuroVIISAS project file containing the anatomical regions and connectivity data of the reconstructed spinal cord connectome. The project can be opened with <code><strong>neuroVIISAS.jar</strong></code>, which is provided separately as part of the Software component of this Figshare project.</li><li><code><strong>cumulated_adjacency_matrix.csv</strong></code> and <code><strong>cumulated_adjacency_matrix.csv.abg.txt</strong></code><br>The CSV file contains the <b>cumulated connectivity adjacency matrix</b>. The accompanying <code>.abg.txt</code> file provides the corresponding anatomical region assignments required to map matrix indices to neuroanatomical structures.</li><li><code><strong>direct_connectivity_average_weight_adjacency_matrix.csv</strong></code> and <code><strong>direct_connectivity_average_weight_adjacency_matrix.csv.abk.txt</strong></code><br>The CSV file contains the adjacency matrix of <b>direct anatomical connectivity using average connection weights</b>. The accompanying <code>.abk.txt</code> file provides the corresponding anatomical region assignments.</li><li><code><strong>bilat.xml</strong></code><br>neuroVIISAS selection file defining the <b>exact bilateral set of anatomical regions used to construct the spinal cord connectome analyzed in the associated publication</b>. In neuroVIISAS, this selection can be loaded via:<br><b>Analysis → Advanced connectivity analysis → File → Load selection</b>.</li></ol><p dir="ltr">The anatomical atlas images optionally used for visualization in neuroVIISAS are <b>not included in this dataset</b>. neuroVIISAS may request these images when the software is started; however, they are <b>not required for loading the connectivity data or performing the connectome analyses described in the associated publication</b>. The atlas images can be made available separately upon specific request.</p><p dir="ltr">Together, these files provide both the native neuroVIISAS representation of the spinal cord connectome and matrix-based representations suitable for independent computational and network analyses.</p> 2026-09-12T10:31:19Z Dataset Dataset 10.6084/m9.figshare.33659944.v1 https://figshare.com/articles/dataset/Spinal_cord_connectome_dataset/33659944 CC BY 4.0