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oai:figshare.com:article/31271971 2026-09-25T15:08:59Z category_31061 category_30944 category_31034 category_30683 portal_1059 item_type_3 month_year_09_2026

Data from: Haplotype-resolved chromosome-level genome assembly of colonial bentgrass, <i>Agrostis capillaris</i> Sunchung Park (22210001) MATTHEW ROBBINS (21087968) Bradley Bushman (17362615) Scott Warnke (22210003) JINYOUNG BARNABY (22857098) Genomics Genomics and transcriptomics Genetics Crop and pasture improvement (incl. selection and breeding) polyploidy subgenomes synteny annotation transposable elements turfgrass <p dir="ltr">Genome sequence with gene annotation files of the colonial bentgrass breeding line BCD genome assembly reported in the manuscript "Haplotype-resolved chromosome-level genome assembly of colonial bentgrass,<i> </i><i>Agrostis capillaris</i>". Both haplotype assemblies from the manuscript are combined. The genome sequence is the 'col_bentv1.0_hap1_hap2.fasta' file which contains both haplotype assemblies from the manuscript combined. The haplotypes are also combined in files for gene annotation (col_bentv1.0_hap1_hap2.gff), transcript sequences (col_bentv1.0_hap1_hap2_cds.fasta), protein sequences (col_bentv1.0_hap1_hap2_pep.fasta), and the transposable element annotation (col_bentv1.0_hap1_hap2_TE_anno.gff). For usability, additional files are separated by haplotype for the gene annotation (col_bentv1.0_hap1.gff and col_bentv1.0_hap2.gff), transcript sequences (col_bentv1.0_hap1_cds.fasta and col_bentv1.0_hap2_cds.fasta), and protein sequences (col_bentv1.0_hap1_pep.fasta and col_bentv1.0_hap2_pep.fasta).</p> 2026-09-25T15:08:59Z Dataset Dataset 10.15482/USDA.ADC/31271971.v1 https://figshare.com/articles/dataset/Data_from_Haplotype-resolved_chromosome-level_genome_assembly_of_colonial_bentgrass_i_Agrostis_capillaris_i_/31271971 U.S. Public Domain