2026-10-13T05:30:32Z
https://api.figshare.com/v2/oai
oai:figshare.com:article/31035040
2026-09-28T07:49:28Z
category_24358
item_type_3
month_year_09_2026
<b>Supplementary Datasets</b>
Yuxian Li (22948039)
Microbial ecology
seamount1
<p dir="ltr">Supplementary Data 1. The temperature, pH, and geochemistry data associated with each of the samples analyzed for this study.</p><p><br></p><p dir="ltr">Supplementary Data 2. Genomic characteristics and taxonomic classification of 2,185 representative metagenome-assembled genomes (rMAGs).</p><p><br></p><p dir="ltr">Supplementary Data 3. Genomic characteristics and taxonomic classification of 10,603 representative viral operational taxonomic units (vOTUs).</p><p><br></p><p dir="ltr">Supplementary Data 4. Relative abundance of 2,185 rMAGs across 51 seamount samples.</p><p><br></p><p dir="ltr">Supplementary Data 5. TPM values of 10,603 vOTUs across 51 seamount samples.</p><p><br></p><p dir="ltr">Supplementary Data 6. Distribution of KO functional genes across 2,185 rMAGs annotated using DRAM.</p><p><br></p><p dir="ltr">Supplementary Data 7. KEGG modules and functional genes across 28 phyla annotated using METABOLIC.</p><p><br></p><p dir="ltr">Supplementary Data 8. Transcript abundance of genes related to prokaryotic carbon, nitrogen, and sulfur metabolism at the ZB seamount.</p><p><br></p><p dir="ltr">Supplementary Data 9. Transcript abundance of genes related to prokaryotic organosulfur metabolism and their corresponding taxonomic information.</p><p><br></p><p dir="ltr">Supplementary Data 10. Transcript abundance (TPM) of organosulfur metabolism-related genes across the top 35 microbial genera.</p><p dir="ltr">Supplementary Data 11. Identifiers and taxonomic classification of DddL homologous protein sequences.</p><p><br></p><p dir="ltr">Supplementary Data 12. Identifiers and taxonomic classification of DmdA homologous protein sequences.</p><p><br></p><p dir="ltr">Supplementary Data 13. Identifiers and taxonomic classification of TauD homologous protein sequences.</p><p><br></p><p dir="ltr">Supplementary Data 14. GC-FPD peak characteristics of DMS produced by recombinant DddL candidates in two independent experiments.</p><p><br></p><p dir="ltr">Supplementary Data 15. HPLC peak characteristics of 5-MTHF produced by recombinant DmdA candidates in two independent experiments.</p><p><br></p><p dir="ltr">Supplementary Data 16. OD415-based quantification of taurine-dependent sulfite production by recombinant TauD candidates.</p><p><br></p><p dir="ltr">Supplementary Data 17. Transcript abundance of prokaryotic genes and their corresponding taxonomic information.</p><p><br></p><p dir="ltr">Supplementary Data 18. Fisher’s LSD grouping letters for level-2 and level-3 KEGG functional categories in Alphaproteobacteria and Gammaproteobacteria across four operational niche-width groups.</p><p><br></p><p dir="ltr">Supplementary Data 19. Competitive mapping-derived relative genomic representation of vOTUs and rMAGs across 51 seamount metagenomes.</p><p><br></p><p dir="ltr">Supplementary Data 20. Count- and TPM-weighted summaries of computationally predicted viral lifestyles across seamounts and depth zones.</p><p><br></p><p dir="ltr">Supplementary Data 21. Virus-host linkages predicted using iPHoP.</p><p><br></p><p dir="ltr">Supplementary Data 22. Viral auxiliary metabolic genes (AMGs) and their transcript abundance in the ZB seamount metatranscriptomes.</p><p><br></p><p dir="ltr">Supplementary Data 23. Host and taxonomic information for viruses encoding TauD.</p><p><br></p><p dir="ltr">Supplementary Data 24. Summary of predicted active-site motifs in viral TauD homologues.</p><p><br></p><p dir="ltr">Supplementary Data 25. Definitions and non-overlapping category assignments of the 306 shared target KOs used for the seamount-Tara Oceans comparison.</p><p><br></p><p dir="ltr">Supplementary Data 26. Analysis-unit metadata and pathway-level TPM sums and proportions used for the formal seamount-Tara Oceans metabolic comparison.</p><p><br></p><p dir="ltr">Supplementary Data 27. Overall and depth-resolved summaries of the seamount-Tara Oceans DNA and RNA metabolic comparison.</p><p><br></p><p dir="ltr">Supplementary Data 28. Statistical tests for the seamount-Tara Oceans DNA and RNA metabolic comparison.</p><p><br></p><p dir="ltr">Supplementary Data 29. Sample availability and denominator audit for the seamount-Tara Oceans DNA and RNA metabolic comparison.</p><p><br></p><p dir="ltr">Supplementary Data 30. Abundances of core functional genes across 51 seamount samples.</p><p dir="ltr">Supplementary Data 31. Top three prokaryotic contributors to the transcript abundance of each core metabolic pathway across sampling sites.</p><p><br></p><p dir="ltr">Supplementary Data 32. Joint RPKM-normalized relative transcriptional composition of prokaryotic phyla and viral classes across ZB seamount metatranscriptomes.</p>
2026-02-03T07:33:25Z
Dataset
Dataset
10.6084/m9.figshare.31035040.v2
https://figshare.com/articles/dataset/_b_Supplementary_Datasets_b_/31035040
CC BY 4.0