2026-10-10T08:35:22Z https://api.figshare.com/v2/oai

oai:figshare.com:article/27085657 2026-09-16T09:30:21Z category_24208 item_type_3 month_year_09_2026

4D Cellular Morphology Atlas Construction Simultaneously Reveals Shape-adhesion Patterns During Embryogenesis Zelin Li (19439638) Zhongying Zhao (6270599) Hong YAN (6408998) Bioinformatics and computational biology not elsewhere classified Shape-transcriptomic patterns Cell adhesion GAN Transformer 4D cellular morphology map <p dir="ltr"><b>3D Shape Training: </b>Ground truth (GT) for training membrane recognition (TUNETr)</p><p dir="ltr"><b>3D Shape Evaluation: </b>GT for evaluation and comparison of segmentation</p><p dir="ltr"><b>2D Time-lapse Evaluation: </b>GT for time-lapse embryos (cell morphology map)</p><p dir="ltr"><b>Nuclei Generative Training: </b>GT for training m2nGAN (pseudo nuclei image generation) with real stained fluorescence images</p><p dir="ltr"><b>Nuclei Generative Evaluation: </b>GT for evaluating m2nGAN (pseudo nuclei image generation) with real stained fluorescence images</p><p dir="ltr"><b>Shape-adhesion E-cadherin</b>: Dataset for discovering shape-adhesion patterns</p><p dir="ltr"><b>GUI DATA Cell Wise</b>: https://drive.google.com/drive/folders/11jgB8V3IMPRL6tE7b9dv-4TBnC8dWlkH?usp=sharing (GUIDataCellWise)</p><p dir="ltr"><br></p><p dir="ltr"><b>CTransformer (mainly TUNETr) Code Link</b>: https://github.com/chiellini/CTransformer</p><p dir="ltr"><b>m2nGAN Code Link:</b> https://github.com/chiellini/m2nGAN</p><p dir="ltr"><b>Image Processing Python Script Link:</b> https://github.com/chiellini/CImageProcessor</p><p dir="ltr"><b>Visualization Python Script Link: </b>https://github.com/chiellini/GUIData</p> 2024-09-23T01:57:04Z Dataset Dataset 10.6084/m9.figshare.27085657.v5 https://figshare.com/articles/dataset/4D_Cellular_Morphology_Atlas_Construction_Simultaneously_Reveals_Shape-adhesion_Patterns_During_Embryogenesis/27085657 CC BY 4.0