2026-10-09T23:58:06Z https://api.figshare.com/v2/oai

oai:figshare.com:article/24792819 2026-09-24T01:03:58Z category_24271 item_type_3 month_year_09_2026

Phylogenomics dataset Kensuke Seto (17614671) Phylogeny and comparative analysis phylogenomics <p dir="ltr">Dataset for phylogenomics analyses of <i>Ancylistes closterii</i> and other zygomycete fungi.</p><ul><li>supermatrix_origina.fasta: Concatenated alignment comprising 185,578 amino acids (aa) of 452 genes in the BUSCO fungi_odb10 database</li><li>preliminary_LGFR10.nwk: Maximum likelihood tree inferred with IQ-TREE 2 (LG+F+R10 model) using the alignment "supermatrix_origina.fasta".</li><li>preliminary_LGC20FGPMSF.nwk: Maximum likelihood tree inferred with IQ-TREE 2 (LG+C20+F+G+PMSF model) using the alignment "supermatrix_origina.fasta".</li><li>supermatrix_final.fasta: Alignment after removal of 50,000 fastest evolving sites in the "supermatrix_origina.fasta"</li><li>final_LGC60FGPMSF.nwk: Maximum likelihood tree inferred with IQ-TREE 2 (LG+C60+F+G+PMSF model) using the alignment "supermatrix_final.fasta"</li><li>final_CATPoisson.nwk: Bayesian tree inferred with PhyloBayes MPI v1.8 (CAT-Poisson+G4 model) using the alignment "supermatrix_final.fasta"</li></ul><p></p> 2026-09-24T01:03:58Z Dataset Dataset 10.6084/m9.figshare.24792819.v1 https://figshare.com/articles/dataset/Phylogenomics_dataset/24792819 CC BY 4.0